STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_6874Hybrid signal transduction histidine kinase J. (1401 aa)    
Predicted Functional Partners:
TRAPUB_9628
Multistep phosphorelay regulator 1.
    
 0.908
TRAPUB_6950
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
    
 0.756
TRAPUB_5196
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.756
TRAPUB_10016
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.736
TRAPUB_6403
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.728
TRAPUB_5776
Streptothricin hydrolase.
    
 0.728
TRAPUB_1874
Uncharacterized protein.
    
 0.728
TRAPUB_11330
annotation not available
    
 0.728
TRAPUB_10598
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.728
TRAPUB_11122
Dihydrolipoyl dehydrogenase.
    
 0.711
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.