STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_6561Dolichyl-phosphate-mannose--protein mannosyltransferase 4. (776 aa)    
Predicted Functional Partners:
TRAPUB_13136
Dolichyl-phosphate-mannose--protein mannosyltransferase 1.
  
0.950
TRAPUB_3045
Dolichyl-phosphate-mannose--protein mannosyltransferase 2.
   
0.924
TRAPUB_2563
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 0.658
TRAPUB_2729
Uncharacterized protein.
     
 0.608
TRAPUB_12771
Uncharacterized protein.
     
 0.608
TRAPUB_10429
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
   
 
 0.594
TRAPUB_4627
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3.
   
 
 0.562
TRAPUB_8160
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
 0.534
TRAPUB_11873
Glyco_hydro_63 domain-containing protein.
   
 
 0.497
TRAPUB_4433
Dolichol kinase sec59.
    
 
 0.474
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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