Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10029 | TRAPUB_12955 | A0A1M2W0P3 | A0A1M2VSE7 | Ras-related protein Rab-11A. | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | 0.863 |
TRAPUB_10029 | TRAPUB_13127 | A0A1M2W0P3 | A0A1M2VS22 | Ras-related protein Rab-11A. | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | 0.852 |
TRAPUB_10029 | TRAPUB_13869 | A0A1M2W0P3 | A0A1M2W7U3 | Ras-related protein Rab-11A. | Endocytosis protein end4. | 0.602 |
TRAPUB_10029 | TRAPUB_1990 | A0A1M2W0P3 | A0A1M2VHU8 | Ras-related protein Rab-11A. | Vacuolar protein sorting/targeting protein 10. | 0.577 |
TRAPUB_10029 | TRAPUB_1991 | A0A1M2W0P3 | A0A1M2VHX7 | Ras-related protein Rab-11A. | Sortilin. | 0.577 |
TRAPUB_10029 | TRAPUB_3004 | A0A1M2W0P3 | A0A1M2VEN0 | Ras-related protein Rab-11A. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.760 |
TRAPUB_10029 | TRAPUB_343 | A0A1M2W0P3 | A0A1M2VME2 | Ras-related protein Rab-11A. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.760 |
TRAPUB_10029 | TRAPUB_5991 | A0A1M2W0P3 | A0A1M2V749 | Ras-related protein Rab-11A. | AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. | 0.848 |
TRAPUB_10029 | TRAPUB_6105 | A0A1M2W0P3 | A0A1M2V705 | Ras-related protein Rab-11A. | EF-hand domain-containing protein. | 0.737 |
TRAPUB_10029 | TRAPUB_6106 | A0A1M2W0P3 | A0A1M2V6V1 | Ras-related protein Rab-11A. | Rab-GAP TBC domain-containing protein. | 0.737 |
TRAPUB_12955 | TRAPUB_10029 | A0A1M2VSE7 | A0A1M2W0P3 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Ras-related protein Rab-11A. | 0.863 |
TRAPUB_12955 | TRAPUB_13869 | A0A1M2VSE7 | A0A1M2W7U3 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Endocytosis protein end4. | 0.750 |
TRAPUB_12955 | TRAPUB_1990 | A0A1M2VSE7 | A0A1M2VHU8 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Vacuolar protein sorting/targeting protein 10. | 0.648 |
TRAPUB_12955 | TRAPUB_1991 | A0A1M2VSE7 | A0A1M2VHX7 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Sortilin. | 0.648 |
TRAPUB_12955 | TRAPUB_3004 | A0A1M2VSE7 | A0A1M2VEN0 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.961 |
TRAPUB_12955 | TRAPUB_343 | A0A1M2VSE7 | A0A1M2VME2 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.961 |
TRAPUB_12955 | TRAPUB_5991 | A0A1M2VSE7 | A0A1M2V749 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. | 0.977 |
TRAPUB_12955 | TRAPUB_6105 | A0A1M2VSE7 | A0A1M2V705 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | EF-hand domain-containing protein. | 0.729 |
TRAPUB_12955 | TRAPUB_6106 | A0A1M2VSE7 | A0A1M2V6V1 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Rab-GAP TBC domain-containing protein. | 0.729 |
TRAPUB_13127 | TRAPUB_10029 | A0A1M2VS22 | A0A1M2W0P3 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | Ras-related protein Rab-11A. | 0.852 |
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