Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10140 | TRAPUB_5830 | A0A1M2W0J3 | A0A1M2V7H0 | Pre-rRNA-processing protein ESF2. | DNA polymerase alpha-associated DNA helicase A. | 0.448 |
TRAPUB_14264 | TRAPUB_5830 | A0A1M2VNV0 | A0A1M2V7H0 | Uncharacterized protein. | DNA polymerase alpha-associated DNA helicase A. | 0.441 |
TRAPUB_14322 | TRAPUB_5830 | A0A1M2VNT1 | A0A1M2V7H0 | Tyrosine--tRNA ligase. | DNA polymerase alpha-associated DNA helicase A. | 0.400 |
TRAPUB_5830 | TRAPUB_10140 | A0A1M2V7H0 | A0A1M2W0J3 | DNA polymerase alpha-associated DNA helicase A. | Pre-rRNA-processing protein ESF2. | 0.448 |
TRAPUB_5830 | TRAPUB_14264 | A0A1M2V7H0 | A0A1M2VNV0 | DNA polymerase alpha-associated DNA helicase A. | Uncharacterized protein. | 0.441 |
TRAPUB_5830 | TRAPUB_14322 | A0A1M2V7H0 | A0A1M2VNT1 | DNA polymerase alpha-associated DNA helicase A. | Tyrosine--tRNA ligase. | 0.400 |
TRAPUB_5830 | TRAPUB_8886 | A0A1M2V7H0 | A0A1M2W426 | DNA polymerase alpha-associated DNA helicase A. | Uncharacterized protein. | 0.441 |
TRAPUB_8886 | TRAPUB_5830 | A0A1M2W426 | A0A1M2V7H0 | Uncharacterized protein. | DNA polymerase alpha-associated DNA helicase A. | 0.441 |