STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_5300Uncharacterized protein. (477 aa)    
Predicted Functional Partners:
TRAPUB_6956
PP2A regulatory subunit TAP46.
    
 0.797
TRAPUB_13706
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.674
TRAPUB_5709
Vacuolar protein-sorting protein BRO1.
   
   0.652
TRAPUB_1801
Cytochrome c oxidase assembly protein COX15.
    
 0.646
TRAPUB_2162
ATP synthase subunit delta, mitochondrial.
    
   0.637
TRAPUB_375
Uncharacterized protein.
     
 0.626
TRAPUB_9992
Uncharacterized protein.
     
 0.626
TRAPUB_13161
Succinate-semialdehyde dehydrogenase.
     
 0.615
TRAPUB_4099
Metallophos domain-containing protein.
    
 
 0.611
TRAPUB_8440
Uncharacterized protein.
    
 
 0.611
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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