STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_4890Uncharacterized protein. (593 aa)    
Predicted Functional Partners:
TRAPUB_10478
Coiled-coil domain-containing protein 25.
    
 0.713
TRAPUB_13126
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.640
TRAPUB_6726
Sec8_exocyst domain-containing protein.
     
 0.635
TRAPUB_11023
Exocyst complex component sec6.
    
 0.625
TRAPUB_966
Sec2p domain-containing protein.
     
 0.624
TRAPUB_10029
Ras-related protein Rab-11A.
     
 0.621
TRAPUB_6519
Uncharacterized protein.
     
 0.602
TRAPUB_13111
Exocyst complex component SEC10.
     
 0.602
TRAPUB_11694
Recyclin-1.
     
 0.602
TRAPUB_13127
ADP-ribosylation factor; Belongs to the cytochrome P450 family.
   
 
 0.592
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.