STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_482354S ribosomal protein rml2, mitochondrial. (405 aa)    
Predicted Functional Partners:
TRAPUB_7362
54S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
 
 0.999
TRAPUB_4534
50S ribosomal protein L4.
 
 0.997
TRAPUB_14422
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
 
 0.997
TRAPUB_6364
50S ribosomal protein L17.
  
 
 0.996
TRAPUB_9258
54S ribosomal protein L10, mitochondrial.
  
 0.996
TRAPUB_14442
54S ribosomal protein L27, mitochondrial.
  
 
 0.994
TRAPUB_2462
54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family.
 
 0.993
TRAPUB_5600
60S ribosomal protein L5-B.
  
 0.992
TRAPUB_5565
60S ribosomal protein L35-3.
  
 0.992
TRAPUB_5432
50S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
 
 0.992
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.