STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_4201Uncharacterized protein. (535 aa)    
Predicted Functional Partners:
TRAPUB_6705
Uncharacterized protein.
    
 0.841
TRAPUB_6683
Uncharacterized protein.
    
 0.841
TRAPUB_4711
Uncharacterized protein.
    
 0.841
TRAPUB_13215
Peroxisomal membrane protein PEX30.
    
 0.841
TRAPUB_12623
Uncharacterized protein.
    
 0.773
TRAPUB_9117
Protein wos2.
     
 0.612
TRAPUB_13223
Uncharacterized protein.
    
 0.576
TRAPUB_11874
Uncharacterized protein.
   
 
 0.507
TRAPUB_11348
Uncharacterized protein.
   
 
 0.507
TRAPUB_2139
Urea active transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.502
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.