STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_4195Eukaryotic translation initiation factor 2 subunit gamma. (475 aa)    
Predicted Functional Partners:
TRAPUB_5711
eIF2B_5 domain-containing protein.
   
 0.999
TIF32
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.999
TRAPUB_297
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.999
TRAPUB_10507
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
TRAPUB_4272
W2 domain-containing protein.
   
 0.998
TRAPUB_3312
40S ribosomal protein S20.
   
 0.998
NIP1
Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.998
TRAPUB_7674
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.997
TRAPUB_4172
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.997
TRAPUB_10341
NTP_transf_3 domain-containing protein.
    
 0.997
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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