Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10153 | TRAPUB_10250 | A0A1M2W0J8 | A0A1M2W040 | Nucleolar protein 58. | WD repeat-containing protein 43. | 0.999 |
TRAPUB_10153 | TRAPUB_11276 | A0A1M2W0J8 | A0A1M2VX98 | Nucleolar protein 58. | U3 small nucleolar RNA-associated protein 20. | 0.996 |
TRAPUB_10153 | TRAPUB_11531 | A0A1M2W0J8 | A0A1M2VWF8 | Nucleolar protein 58. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.990 |
TRAPUB_10153 | TRAPUB_3616 | A0A1M2W0J8 | A0A1M2VDF5 | Nucleolar protein 58. | Beta-lactamase domain-containing protein. | 0.732 |
TRAPUB_10153 | TRAPUB_5594 | A0A1M2W0J8 | A0A1M2V840 | Nucleolar protein 58. | U3 small nucleolar RNA-associated protein 15. | 0.999 |
TRAPUB_10153 | TRAPUB_6748 | A0A1M2W0J8 | A0A1M2V5B8 | Nucleolar protein 58. | WD repeat-containing protein 75. | 0.999 |
TRAPUB_10153 | TRAPUB_9079 | A0A1M2W0J8 | A0A1M2W3C7 | Nucleolar protein 58. | U3 small nucleolar RNA-associated protein 4. | 0.999 |
TRAPUB_10250 | TRAPUB_10153 | A0A1M2W040 | A0A1M2W0J8 | WD repeat-containing protein 43. | Nucleolar protein 58. | 0.999 |
TRAPUB_10250 | TRAPUB_11276 | A0A1M2W040 | A0A1M2VX98 | WD repeat-containing protein 43. | U3 small nucleolar RNA-associated protein 20. | 0.997 |
TRAPUB_10250 | TRAPUB_11531 | A0A1M2W040 | A0A1M2VWF8 | WD repeat-containing protein 43. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.985 |
TRAPUB_10250 | TRAPUB_3616 | A0A1M2W040 | A0A1M2VDF5 | WD repeat-containing protein 43. | Beta-lactamase domain-containing protein. | 0.741 |
TRAPUB_10250 | TRAPUB_5594 | A0A1M2W040 | A0A1M2V840 | WD repeat-containing protein 43. | U3 small nucleolar RNA-associated protein 15. | 0.999 |
TRAPUB_10250 | TRAPUB_6748 | A0A1M2W040 | A0A1M2V5B8 | WD repeat-containing protein 43. | WD repeat-containing protein 75. | 0.999 |
TRAPUB_10250 | TRAPUB_9079 | A0A1M2W040 | A0A1M2W3C7 | WD repeat-containing protein 43. | U3 small nucleolar RNA-associated protein 4. | 0.999 |
TRAPUB_11000 | TRAPUB_13301 | A0A1M2VXS6 | A0A1M2VRJ4 | Nitrate reductase [NADH] 1. | Ankyrin repeat protein nuc-2. | 0.512 |
TRAPUB_11000 | TRAPUB_3616 | A0A1M2VXS6 | A0A1M2VDF5 | Nitrate reductase [NADH] 1. | Beta-lactamase domain-containing protein. | 0.793 |
TRAPUB_11000 | TRAPUB_8972 | A0A1M2VXS6 | A0A1M2W3Y2 | Nitrate reductase [NADH] 1. | Nitrate reductase [NADH] 1. | 0.965 |
TRAPUB_11276 | TRAPUB_10153 | A0A1M2VX98 | A0A1M2W0J8 | U3 small nucleolar RNA-associated protein 20. | Nucleolar protein 58. | 0.996 |
TRAPUB_11276 | TRAPUB_10250 | A0A1M2VX98 | A0A1M2W040 | U3 small nucleolar RNA-associated protein 20. | WD repeat-containing protein 43. | 0.997 |
TRAPUB_11276 | TRAPUB_11531 | A0A1M2VX98 | A0A1M2VWF8 | U3 small nucleolar RNA-associated protein 20. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.995 |
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