STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_3411Proteasome activator complex subunit 4. (1702 aa)    
Predicted Functional Partners:
TRAPUB_10946
Proteasome subunit beta.
    
 0.952
TRAPUB_10948
Proteasome subunit alpha type.
    
 0.950
TRAPUB_9923
26S proteasome non-ATPase regulatory subunit 4-like protein.
    
 0.950
TRAPUB_1795
Proteasome subunit alpha type.
    
 0.949
TRAPUB_1643
Proteasome subunit alpha type.
    
 0.946
TRAPUB_14315
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
 0.945
TRAPUB_12452
Proteasome subunit beta.
    
 0.945
TRAPUB_415
Proteasome subunit alpha type.
    
 0.944
TRAPUB_1800
Proteasome subunit alpha type.
    
 0.942
TRAPUB_1114
Proteasome endopeptidase complex.
    
 0.941
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.