Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10 | TRAPUB_12623 | A0A1M2VNA4 | A0A1M2VTD1 | UBA domain-containing protein 7. | Uncharacterized protein. | 0.659 |
TRAPUB_10 | TRAPUB_13301 | A0A1M2VNA4 | A0A1M2VRJ4 | UBA domain-containing protein 7. | Ankyrin repeat protein nuc-2. | 0.660 |
TRAPUB_10 | TRAPUB_13447 | A0A1M2VNA4 | A0A1M2VR57 | UBA domain-containing protein 7. | 26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.605 |
TRAPUB_10 | TRAPUB_3269 | A0A1M2VNA4 | A0A1M2VE78 | UBA domain-containing protein 7. | Vegetative incompatibility protein HET-E-1. | 0.704 |
TRAPUB_10 | TRAPUB_7778 | A0A1M2VNA4 | A0A1M2V2A6 | UBA domain-containing protein 7. | annotation not available | 0.705 |
TRAPUB_10 | TRAPUB_9923 | A0A1M2VNA4 | A0A1M2W0Y9 | UBA domain-containing protein 7. | 26S proteasome non-ATPase regulatory subunit 4-like protein. | 0.601 |
TRAPUB_12467 | TRAPUB_13223 | A0A1M2VTS5 | A0A1M2VRN0 | Uncharacterized protein. | Uncharacterized protein. | 0.743 |
TRAPUB_12467 | TRAPUB_13301 | A0A1M2VTS5 | A0A1M2VRJ4 | Uncharacterized protein. | Ankyrin repeat protein nuc-2. | 0.595 |
TRAPUB_12467 | TRAPUB_3269 | A0A1M2VTS5 | A0A1M2VE78 | Uncharacterized protein. | Vegetative incompatibility protein HET-E-1. | 0.670 |
TRAPUB_12623 | TRAPUB_10 | A0A1M2VTD1 | A0A1M2VNA4 | Uncharacterized protein. | UBA domain-containing protein 7. | 0.659 |
TRAPUB_12623 | TRAPUB_13223 | A0A1M2VTD1 | A0A1M2VRN0 | Uncharacterized protein. | Uncharacterized protein. | 0.912 |
TRAPUB_12623 | TRAPUB_13301 | A0A1M2VTD1 | A0A1M2VRJ4 | Uncharacterized protein. | Ankyrin repeat protein nuc-2. | 0.668 |
TRAPUB_12623 | TRAPUB_3269 | A0A1M2VTD1 | A0A1M2VE78 | Uncharacterized protein. | Vegetative incompatibility protein HET-E-1. | 0.660 |
TRAPUB_13214 | TRAPUB_13301 | A0A1M2VRT4 | A0A1M2VRJ4 | Uncharacterized protein. | Ankyrin repeat protein nuc-2. | 0.895 |
TRAPUB_13214 | TRAPUB_3269 | A0A1M2VRT4 | A0A1M2VE78 | Uncharacterized protein. | Vegetative incompatibility protein HET-E-1. | 0.661 |
TRAPUB_13214 | TRAPUB_7778 | A0A1M2VRT4 | A0A1M2V2A6 | Uncharacterized protein. | annotation not available | 0.523 |
TRAPUB_13223 | TRAPUB_12467 | A0A1M2VRN0 | A0A1M2VTS5 | Uncharacterized protein. | Uncharacterized protein. | 0.743 |
TRAPUB_13223 | TRAPUB_12623 | A0A1M2VRN0 | A0A1M2VTD1 | Uncharacterized protein. | Uncharacterized protein. | 0.912 |
TRAPUB_13223 | TRAPUB_13301 | A0A1M2VRN0 | A0A1M2VRJ4 | Uncharacterized protein. | Ankyrin repeat protein nuc-2. | 0.679 |
TRAPUB_13223 | TRAPUB_3269 | A0A1M2VRN0 | A0A1M2VE78 | Uncharacterized protein. | Vegetative incompatibility protein HET-E-1. | 0.646 |
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