Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10968 | TRAPUB_3208 | A0A1M2VY06 | A0A1M2VEE7 | UV excision repair protein rhp23. | Prenylcysteine oxidase. | 0.416 |
TRAPUB_10968 | TRAPUB_3302 | A0A1M2VY06 | A0A1M2VE79 | UV excision repair protein rhp23. | Protein cwh43. | 0.410 |
TRAPUB_3208 | TRAPUB_10968 | A0A1M2VEE7 | A0A1M2VY06 | Prenylcysteine oxidase. | UV excision repair protein rhp23. | 0.416 |
TRAPUB_3208 | TRAPUB_3302 | A0A1M2VEE7 | A0A1M2VE79 | Prenylcysteine oxidase. | Protein cwh43. | 0.403 |
TRAPUB_3208 | TRAPUB_3740 | A0A1M2VEE7 | A0A1M2VCX1 | Prenylcysteine oxidase. | Protein farnesyltransferase subunit beta. | 0.467 |
TRAPUB_3208 | TRAPUB_8107 | A0A1M2VEE7 | A0A1M2W624 | Prenylcysteine oxidase. | Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. | 0.447 |
TRAPUB_3302 | TRAPUB_10968 | A0A1M2VE79 | A0A1M2VY06 | Protein cwh43. | UV excision repair protein rhp23. | 0.410 |
TRAPUB_3302 | TRAPUB_3208 | A0A1M2VE79 | A0A1M2VEE7 | Protein cwh43. | Prenylcysteine oxidase. | 0.403 |
TRAPUB_3740 | TRAPUB_3208 | A0A1M2VCX1 | A0A1M2VEE7 | Protein farnesyltransferase subunit beta. | Prenylcysteine oxidase. | 0.467 |
TRAPUB_8107 | TRAPUB_3208 | A0A1M2W624 | A0A1M2VEE7 | Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. | Prenylcysteine oxidase. | 0.447 |