STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_2940Chromo domain-containing protein. (738 aa)    
Predicted Functional Partners:
TRAPUB_318
Histone-lysine N-methyltransferase, H3 lysine-9 specific.
    
 0.923
TRAPUB_10231
Post-SET domain-containing protein.
    
 0.901
TRAPUB_5207
Histone H3.
    
 0.874
TRAPUB_4817
Histone H3.2.
    
 0.874
TRAPUB_13567
Histone H3; Belongs to the histone H3 family.
    
 0.874
TRAPUB_11039
Histone H3; Belongs to the histone H3 family.
    
 0.874
TRAPUB_6727
Chromatin remodeling factor mit1.
    
 0.818
TRAPUB_346
Histone H2A; Belongs to the histone H2A family.
   
 0.774
TRAPUB_825
DUF2236 domain-containing protein.
    
 0.725
TRAPUB_13569
Uncharacterized protein.
    
 0.725
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.