STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_2276Pkinase_fungal domain-containing protein. (333 aa)    
Predicted Functional Partners:
TRAPUB_10277
Developmental regulator flbA.
    
 0.807
TRAPUB_1941
Uncharacterized protein.
   
 0.779
TRAPUB_1942
Uridine-cytidine kinase-like 1.
   
 0.779
TRAPUB_9919
Uracil phosphoribosyltransferase.
   
 0.779
TRAPUB_9731
Uracil phosphoribosyltransferase.
   
 0.779
TRAPUB_2440
Ubiquitin-40S ribosomal protein S27a.
    
  0.770
TRAPUB_9587
Ubiquitin-like domain-containing protein.
    
  0.770
TRAPUB_8123
Nicotinamide riboside kinase.
    
 0.765
TRAPUB_5226
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 0.715
TRAPUB_949
Opioid growth factor receptor.
    
 0.715
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.