Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10286 | TRAPUB_12955 | A0A1M2VZT7 | A0A1M2VSE7 | Syntaxin-6. | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | 0.639 |
TRAPUB_10286 | TRAPUB_13127 | A0A1M2VZT7 | A0A1M2VS22 | Syntaxin-6. | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | 0.610 |
TRAPUB_10286 | TRAPUB_1333 | A0A1M2VZT7 | A0A1M2VJE9 | Syntaxin-6. | t-SNARE coiled-coil homology domain-containing protein. | 0.792 |
TRAPUB_10286 | TRAPUB_2205 | A0A1M2VZT7 | A0A1M2VH69 | Syntaxin-6. | Vacuolar morphogenesis protein 7-like protein. | 0.619 |
TRAPUB_10286 | TRAPUB_7303 | A0A1M2VZT7 | A0A1M2V3N0 | Syntaxin-6. | Syntaxin-22. | 0.982 |
TRAPUB_10286 | TRAPUB_757 | A0A1M2VZT7 | A0A1M2VL75 | Syntaxin-6. | Vesicle transport v-SNARE 13. | 0.999 |
TRAPUB_10286 | TRAPUB_8561 | A0A1M2VZT7 | A0A1M2W4V7 | Syntaxin-6. | Uncharacterized protein. | 0.592 |
TRAPUB_12889 | TRAPUB_12955 | A0A1M2VSS9 | A0A1M2VSE7 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | 0.717 |
TRAPUB_12889 | TRAPUB_13127 | A0A1M2VSS9 | A0A1M2VS22 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | 0.708 |
TRAPUB_12889 | TRAPUB_13973 | A0A1M2VSS9 | A0A1M2VPV7 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | RAD50-interacting protein 1. | 0.668 |
TRAPUB_12889 | TRAPUB_2205 | A0A1M2VSS9 | A0A1M2VH69 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Vacuolar morphogenesis protein 7-like protein. | 0.630 |
TRAPUB_12955 | TRAPUB_10286 | A0A1M2VSE7 | A0A1M2VZT7 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Syntaxin-6. | 0.639 |
TRAPUB_12955 | TRAPUB_12889 | A0A1M2VSE7 | A0A1M2VSS9 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.717 |
TRAPUB_12955 | TRAPUB_1333 | A0A1M2VSE7 | A0A1M2VJE9 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | t-SNARE coiled-coil homology domain-containing protein. | 0.610 |
TRAPUB_12955 | TRAPUB_2205 | A0A1M2VSE7 | A0A1M2VH69 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Vacuolar morphogenesis protein 7-like protein. | 0.655 |
TRAPUB_12955 | TRAPUB_757 | A0A1M2VSE7 | A0A1M2VL75 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Vesicle transport v-SNARE 13. | 0.647 |
TRAPUB_13127 | TRAPUB_10286 | A0A1M2VS22 | A0A1M2VZT7 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | Syntaxin-6. | 0.610 |
TRAPUB_13127 | TRAPUB_12889 | A0A1M2VS22 | A0A1M2VSS9 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.708 |
TRAPUB_13127 | TRAPUB_1333 | A0A1M2VS22 | A0A1M2VJE9 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | t-SNARE coiled-coil homology domain-containing protein. | 0.610 |
TRAPUB_13127 | TRAPUB_2205 | A0A1M2VS22 | A0A1M2VH69 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | Vacuolar morphogenesis protein 7-like protein. | 0.655 |
page 1 of 4