STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_1778TPR_REGION domain-containing protein. (207 aa)    
Predicted Functional Partners:
TRAPUB_9117
Protein wos2.
    
 0.962
TRAPUB_7923
Uncharacterized protein.
    
 0.880
TRAPUB_6988
Uncharacterized protein.
    
 0.880
TRAPUB_6116
Flavin_Reduct domain-containing protein.
    
 0.880
TRAPUB_5724
Uncharacterized protein.
    
 0.880
TRAPUB_1211
Uncharacterized protein.
    
 0.880
TRAPUB_338
Uncharacterized protein.
    
 0.880
TRAPUB_10784
Uncharacterized protein.
    
 0.880
TRAPUB_12244
Uncharacterized protein.
    
 0.880
TRAPUB_4690
Tuberous sclerosis 1 protein-like protein.
    
 0.880
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.