STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_1551Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
TRAPUB_12526
60S ribosomal protein L14.
  
 0.989
TRAPUB_5719
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.988
TRAPUB_5183
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.988
TRAPUB_4827
60S ribosomal protein L21-B.
   
 0.988
TRAPUB_3219
60S ribosomal protein L31.
   
 0.988
TRAPUB_3243
60S ribosomal protein L34-A.
  
 0.988
TRAPUB_3024
60S ribosomal protein L26-2.
  
 0.988
TRAPUB_10424
Elongation factor 3.
   
   0.988
TRAPUB_10525
60S ribosomal protein L32-A.
   
 0.988
TRAPUB_10167
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
   
 0.988
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.