STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_1258Mitochondrial import receptor subunit TOM40. (357 aa)    
Predicted Functional Partners:
TRAPUB_1008
Mitochondrial import receptor subunit tom22.
   
 0.990
TRAPUB_89
Mitochondrial import receptor subunit tom20.
   
 0.988
TRAPUB_12673
Mitochondrial import receptor subunit tom70.
    
 0.985
TRAPUB_8620
SAM50-like protein SPAC17C9.06.
    
 0.982
TRAPUB_14085
Mitochondrial outer membrane protein porin.
    
 0.973
TRAPUB_3086
Metaxin-like protein.
    
 0.972
TRAPUB_4982
Uncharacterized protein.
    
 0.964
TRAPUB_11051
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.960
TRAPUB_9080
Mitochondrial import inner membrane translocase subunit TIM10.
  
 0.907
TRAPUB_6542
Cytochrome c1, heme protein, mitochondrial.
   
 0.837
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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