Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10 | TRAPUB_1137 | A0A1M2VNA4 | A0A1M2VK36 | UBA domain-containing protein 7. | Uncharacterized protein. | 0.748 |
TRAPUB_10 | TRAPUB_1882 | A0A1M2VNA4 | A0A1M2VIB2 | UBA domain-containing protein 7. | Set1 complex component ash2. | 0.884 |
TRAPUB_10 | TRAPUB_4475 | A0A1M2VNA4 | A0A1M2VAM3 | UBA domain-containing protein 7. | Serine/threonine-protein phosphatase. | 0.582 |
TRAPUB_10 | TRAPUB_4880 | A0A1M2VNA4 | A0A1M2V9Y8 | UBA domain-containing protein 7. | Retinoblastoma-binding protein 5-like protein. | 0.897 |
TRAPUB_10 | TRAPUB_8567 | A0A1M2VNA4 | A0A1M2W4Y3 | UBA domain-containing protein 7. | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | 0.582 |
TRAPUB_1137 | TRAPUB_10 | A0A1M2VK36 | A0A1M2VNA4 | Uncharacterized protein. | UBA domain-containing protein 7. | 0.748 |
TRAPUB_1137 | TRAPUB_1882 | A0A1M2VK36 | A0A1M2VIB2 | Uncharacterized protein. | Set1 complex component ash2. | 0.733 |
TRAPUB_1137 | TRAPUB_1917 | A0A1M2VK36 | A0A1M2VI28 | Uncharacterized protein. | Uncharacterized protein. | 0.808 |
TRAPUB_1137 | TRAPUB_1918 | A0A1M2VK36 | A0A1M2VI22 | Uncharacterized protein. | Calcium-channel protein cch1. | 0.808 |
TRAPUB_1137 | TRAPUB_3757 | A0A1M2VK36 | A0A1M2VCR2 | Uncharacterized protein. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.726 |
TRAPUB_1137 | TRAPUB_4475 | A0A1M2VK36 | A0A1M2VAM3 | Uncharacterized protein. | Serine/threonine-protein phosphatase. | 0.755 |
TRAPUB_1137 | TRAPUB_4880 | A0A1M2VK36 | A0A1M2V9Y8 | Uncharacterized protein. | Retinoblastoma-binding protein 5-like protein. | 0.733 |
TRAPUB_1137 | TRAPUB_4940 | A0A1M2VK36 | A0A1M2V9S7 | Uncharacterized protein. | Nucleoporin nup132. | 0.725 |
TRAPUB_1137 | TRAPUB_8567 | A0A1M2VK36 | A0A1M2W4Y3 | Uncharacterized protein. | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | 0.755 |
TRAPUB_1137 | TRAPUB_9269 | A0A1M2VK36 | A0A1M2W2S0 | Uncharacterized protein. | Uncharacterized protein. | 0.786 |
TRAPUB_1882 | TRAPUB_10 | A0A1M2VIB2 | A0A1M2VNA4 | Set1 complex component ash2. | UBA domain-containing protein 7. | 0.884 |
TRAPUB_1882 | TRAPUB_1137 | A0A1M2VIB2 | A0A1M2VK36 | Set1 complex component ash2. | Uncharacterized protein. | 0.733 |
TRAPUB_1882 | TRAPUB_4880 | A0A1M2VIB2 | A0A1M2V9Y8 | Set1 complex component ash2. | Retinoblastoma-binding protein 5-like protein. | 0.999 |
TRAPUB_1917 | TRAPUB_1137 | A0A1M2VI28 | A0A1M2VK36 | Uncharacterized protein. | Uncharacterized protein. | 0.808 |
TRAPUB_1917 | TRAPUB_1918 | A0A1M2VI28 | A0A1M2VI22 | Uncharacterized protein. | Calcium-channel protein cch1. | 0.888 |
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