Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_1014 | TRAPUB_10877 | A0A1M2VKE9 | A0A1M2VYL5 | Uncharacterized protein. | Galactinol synthase 2. | 0.527 |
TRAPUB_1014 | TRAPUB_11873 | A0A1M2VKE9 | A0A1M2VVI0 | Uncharacterized protein. | Glyco_hydro_63 domain-containing protein. | 0.494 |
TRAPUB_1014 | TRAPUB_13421 | A0A1M2VKE9 | A0A1M2VR50 | Uncharacterized protein. | Glycogenin-1. | 0.527 |
TRAPUB_1014 | TRAPUB_1525 | A0A1M2VKE9 | A0A1M2VJ45 | Uncharacterized protein. | General stress protein A. | 0.527 |
TRAPUB_1014 | TRAPUB_1940 | A0A1M2VKE9 | A0A1M2VI07 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 2. | 0.527 |
TRAPUB_1014 | TRAPUB_3461 | A0A1M2VKE9 | A0A1M2VDV0 | Uncharacterized protein. | Inositol phosphorylceramide glucuronosyltransferase 1. | 0.527 |
TRAPUB_1014 | TRAPUB_4341 | A0A1M2VKE9 | A0A1M2VBI7 | Uncharacterized protein. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.545 |
TRAPUB_1014 | TRAPUB_4877 | A0A1M2VKE9 | A0A1M2V9V3 | Uncharacterized protein. | Glucosidase 2 subunit beta. | 0.845 |
TRAPUB_1014 | TRAPUB_5715 | A0A1M2VKE9 | A0A1M2V816 | Uncharacterized protein. | Nucleoporin nup44. | 0.483 |
TRAPUB_1014 | TRAPUB_637 | A0A1M2VKE9 | A0A1M2VLG2 | Uncharacterized protein. | Calnexin-like protein. | 0.512 |
TRAPUB_10877 | TRAPUB_1014 | A0A1M2VYL5 | A0A1M2VKE9 | Galactinol synthase 2. | Uncharacterized protein. | 0.527 |
TRAPUB_10877 | TRAPUB_4341 | A0A1M2VYL5 | A0A1M2VBI7 | Galactinol synthase 2. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.777 |
TRAPUB_11873 | TRAPUB_1014 | A0A1M2VVI0 | A0A1M2VKE9 | Glyco_hydro_63 domain-containing protein. | Uncharacterized protein. | 0.494 |
TRAPUB_11873 | TRAPUB_4341 | A0A1M2VVI0 | A0A1M2VBI7 | Glyco_hydro_63 domain-containing protein. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.756 |
TRAPUB_11873 | TRAPUB_637 | A0A1M2VVI0 | A0A1M2VLG2 | Glyco_hydro_63 domain-containing protein. | Calnexin-like protein. | 0.911 |
TRAPUB_13421 | TRAPUB_1014 | A0A1M2VR50 | A0A1M2VKE9 | Glycogenin-1. | Uncharacterized protein. | 0.527 |
TRAPUB_13421 | TRAPUB_4341 | A0A1M2VR50 | A0A1M2VBI7 | Glycogenin-1. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.898 |
TRAPUB_1525 | TRAPUB_1014 | A0A1M2VJ45 | A0A1M2VKE9 | General stress protein A. | Uncharacterized protein. | 0.527 |
TRAPUB_1525 | TRAPUB_4341 | A0A1M2VJ45 | A0A1M2VBI7 | General stress protein A. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.777 |
TRAPUB_1940 | TRAPUB_1014 | A0A1M2VI07 | A0A1M2VKE9 | Cytoplasmic tRNA 2-thiolation protein 2. | Uncharacterized protein. | 0.527 |
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