STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_1014Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
TRAPUB_4877
Glucosidase 2 subunit beta.
   
 0.845
TRAPUB_4341
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.545
TRAPUB_3461
Inositol phosphorylceramide glucuronosyltransferase 1.
     
 0.527
TRAPUB_1940
Cytoplasmic tRNA 2-thiolation protein 2.
     
 0.527
TRAPUB_1525
General stress protein A.
     
 0.527
TRAPUB_13421
Glycogenin-1.
     
 0.527
TRAPUB_10877
Galactinol synthase 2.
     
 0.527
TRAPUB_637
Calnexin-like protein.
    
 
 0.512
TRAPUB_11873
Glyco_hydro_63 domain-containing protein.
    
 0.494
TRAPUB_5715
Nucleoporin nup44.
    
 0.483
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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