Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_13268 | TRAPUB_2169 | A0A1M2VRE4 | A0A1M2VH98 | BRCT domain-containing protein. | DNA polymerase kappa. | 0.968 |
TRAPUB_13268 | TRAPUB_2440 | A0A1M2VRE4 | A0A1M2VGL6 | BRCT domain-containing protein. | Ubiquitin-40S ribosomal protein S27a. | 0.892 |
TRAPUB_13268 | TRAPUB_4129 | A0A1M2VRE4 | A0A1M2VBW3 | BRCT domain-containing protein. | Polyubiquitin. | 0.845 |
TRAPUB_13268 | TRAPUB_4130 | A0A1M2VRE4 | A0A1M2VBY4 | BRCT domain-containing protein. | Polyubiquitin. | 0.845 |
TRAPUB_13268 | TRAPUB_4131 | A0A1M2VRE4 | A0A1M2VC23 | BRCT domain-containing protein. | Polyubiquitin. | 0.845 |
TRAPUB_13268 | TRAPUB_718 | A0A1M2VRE4 | A0A1M2VL99 | BRCT domain-containing protein. | Uncharacterized protein. | 0.708 |
TRAPUB_13268 | TRAPUB_7839 | A0A1M2VRE4 | A0A1M2V2G8 | BRCT domain-containing protein. | N-acetyltransferase eso1. | 0.978 |
TRAPUB_13268 | TRAPUB_8876 | A0A1M2VRE4 | A0A1M2W4C2 | BRCT domain-containing protein. | N-acetyltransferase eso1. | 0.978 |
TRAPUB_13268 | TRAPUB_9587 | A0A1M2VRE4 | A0A1M2W1Y2 | BRCT domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.892 |
TRAPUB_2169 | TRAPUB_13268 | A0A1M2VH98 | A0A1M2VRE4 | DNA polymerase kappa. | BRCT domain-containing protein. | 0.968 |
TRAPUB_2169 | TRAPUB_2440 | A0A1M2VH98 | A0A1M2VGL6 | DNA polymerase kappa. | Ubiquitin-40S ribosomal protein S27a. | 0.798 |
TRAPUB_2169 | TRAPUB_2930 | A0A1M2VH98 | A0A1M2VF67 | DNA polymerase kappa. | DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. | 0.982 |
TRAPUB_2169 | TRAPUB_4129 | A0A1M2VH98 | A0A1M2VBW3 | DNA polymerase kappa. | Polyubiquitin. | 0.780 |
TRAPUB_2169 | TRAPUB_4130 | A0A1M2VH98 | A0A1M2VBY4 | DNA polymerase kappa. | Polyubiquitin. | 0.780 |
TRAPUB_2169 | TRAPUB_4131 | A0A1M2VH98 | A0A1M2VC23 | DNA polymerase kappa. | Polyubiquitin. | 0.780 |
TRAPUB_2169 | TRAPUB_718 | A0A1M2VH98 | A0A1M2VL99 | DNA polymerase kappa. | Uncharacterized protein. | 0.708 |
TRAPUB_2169 | TRAPUB_7839 | A0A1M2VH98 | A0A1M2V2G8 | DNA polymerase kappa. | N-acetyltransferase eso1. | 0.898 |
TRAPUB_2169 | TRAPUB_8876 | A0A1M2VH98 | A0A1M2W4C2 | DNA polymerase kappa. | N-acetyltransferase eso1. | 0.898 |
TRAPUB_2169 | TRAPUB_9587 | A0A1M2VH98 | A0A1M2W1Y2 | DNA polymerase kappa. | Ubiquitin-like domain-containing protein. | 0.787 |
TRAPUB_2440 | TRAPUB_13268 | A0A1M2VGL6 | A0A1M2VRE4 | Ubiquitin-40S ribosomal protein S27a. | BRCT domain-containing protein. | 0.892 |
page 1 of 5