Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10167 | TRAPUB_10424 | A0A1M2W089 | A0A1M2VZI5 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | Elongation factor 3. | 0.991 |
TRAPUB_10167 | TRAPUB_10525 | A0A1M2W089 | A0A1M2VZK0 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | 60S ribosomal protein L32-A. | 0.999 |
TRAPUB_10167 | TRAPUB_12526 | A0A1M2W089 | A0A1M2VTN7 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | 60S ribosomal protein L14. | 0.999 |
TRAPUB_10167 | TRAPUB_2094 | A0A1M2W089 | A0A1M2VHK2 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | 60S ribosomal protein L24-A. | 0.999 |
TRAPUB_10167 | TRAPUB_3219 | A0A1M2W089 | A0A1M2VE88 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | 60S ribosomal protein L31. | 0.999 |
TRAPUB_10167 | TRAPUB_5600 | A0A1M2W089 | A0A1M2V847 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | 60S ribosomal protein L5-B. | 0.999 |
TRAPUB_10167 | TRAPUB_5719 | A0A1M2W089 | A0A1M2V7W8 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | 60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. | 0.999 |
TRAPUB_10167 | TRAPUB_6547 | A0A1M2W089 | A0A1M2V5S0 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | 60S ribosomal protein L30-1. | 0.999 |
TRAPUB_10167 | TRAPUB_716 | A0A1M2W089 | A0A1M2VLC5 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | Uncharacterized protein. | 0.946 |
TRAPUB_10167 | TRAPUB_8918 | A0A1M2W089 | A0A1M2W3S6 | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | mRNA export factor elf1. | 0.990 |
TRAPUB_10424 | TRAPUB_10167 | A0A1M2VZI5 | A0A1M2W089 | Elongation factor 3. | 60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. | 0.991 |
TRAPUB_10424 | TRAPUB_10525 | A0A1M2VZI5 | A0A1M2VZK0 | Elongation factor 3. | 60S ribosomal protein L32-A. | 0.990 |
TRAPUB_10424 | TRAPUB_12526 | A0A1M2VZI5 | A0A1M2VTN7 | Elongation factor 3. | 60S ribosomal protein L14. | 0.990 |
TRAPUB_10424 | TRAPUB_2094 | A0A1M2VZI5 | A0A1M2VHK2 | Elongation factor 3. | 60S ribosomal protein L24-A. | 0.988 |
TRAPUB_10424 | TRAPUB_3219 | A0A1M2VZI5 | A0A1M2VE88 | Elongation factor 3. | 60S ribosomal protein L31. | 0.988 |
TRAPUB_10424 | TRAPUB_5600 | A0A1M2VZI5 | A0A1M2V847 | Elongation factor 3. | 60S ribosomal protein L5-B. | 0.996 |
TRAPUB_10424 | TRAPUB_5719 | A0A1M2VZI5 | A0A1M2V7W8 | Elongation factor 3. | 60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. | 0.992 |
TRAPUB_10424 | TRAPUB_6547 | A0A1M2VZI5 | A0A1M2V5S0 | Elongation factor 3. | 60S ribosomal protein L30-1. | 0.989 |
TRAPUB_10424 | TRAPUB_716 | A0A1M2VZI5 | A0A1M2VLC5 | Elongation factor 3. | Uncharacterized protein. | 0.961 |
TRAPUB_10424 | TRAPUB_8918 | A0A1M2VZI5 | A0A1M2W3S6 | Elongation factor 3. | mRNA export factor elf1. | 0.997 |
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