Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10518 | TRAPUB_1694 | A0A1M2VZI6 | A0A1M2VIM5 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5. | Uncharacterized protein. | 0.994 |
TRAPUB_10518 | TRAPUB_2032 | A0A1M2VZI6 | A0A1M2VHQ5 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5. | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
TRAPUB_10518 | TRAPUB_319 | A0A1M2VZI6 | A0A1M2VMM3 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5. | Cellulose-growth-specific protein. | 0.714 |
TRAPUB_10518 | TRAPUB_672 | A0A1M2VZI6 | A0A1M2VLL0 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5. | NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family. | 0.999 |
TRAPUB_10518 | TRAPUB_9924 | A0A1M2VZI6 | A0A1M2W105 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5. | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7. | 0.999 |
TRAPUB_12934 | TRAPUB_319 | A0A1M2VSE5 | A0A1M2VMM3 | Small nuclear ribonucleoprotein F. | Cellulose-growth-specific protein. | 0.689 |
TRAPUB_12934 | TRAPUB_4278 | A0A1M2VSE5 | A0A1M2VBN5 | Small nuclear ribonucleoprotein F. | Uncharacterized protein. | 0.964 |
TRAPUB_13870 | TRAPUB_319 | A0A1M2VPU3 | A0A1M2VMM3 | DNA polymerase. | Cellulose-growth-specific protein. | 0.721 |
TRAPUB_13870 | TRAPUB_5016 | A0A1M2VPU3 | A0A1M2V9R6 | DNA polymerase. | DNA repair protein rad16. | 0.807 |
TRAPUB_13870 | TRAPUB_9223 | A0A1M2VPU3 | A0A1M2W2Y0 | DNA polymerase. | DNA polymerase delta small subunit. | 0.999 |
TRAPUB_1694 | TRAPUB_10518 | A0A1M2VIM5 | A0A1M2VZI6 | Uncharacterized protein. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5. | 0.994 |
TRAPUB_1694 | TRAPUB_2032 | A0A1M2VIM5 | A0A1M2VHQ5 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
TRAPUB_1694 | TRAPUB_319 | A0A1M2VIM5 | A0A1M2VMM3 | Uncharacterized protein. | Cellulose-growth-specific protein. | 0.684 |
TRAPUB_1694 | TRAPUB_672 | A0A1M2VIM5 | A0A1M2VLL0 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family. | 0.999 |
TRAPUB_1694 | TRAPUB_9924 | A0A1M2VIM5 | A0A1M2W105 | Uncharacterized protein. | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7. | 0.999 |
TRAPUB_2032 | TRAPUB_10518 | A0A1M2VHQ5 | A0A1M2VZI6 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5. | 0.999 |
TRAPUB_2032 | TRAPUB_1694 | A0A1M2VHQ5 | A0A1M2VIM5 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Uncharacterized protein. | 0.999 |
TRAPUB_2032 | TRAPUB_319 | A0A1M2VHQ5 | A0A1M2VMM3 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Cellulose-growth-specific protein. | 0.725 |
TRAPUB_2032 | TRAPUB_672 | A0A1M2VHQ5 | A0A1M2VLL0 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family. | 0.999 |
TRAPUB_2032 | TRAPUB_9924 | A0A1M2VHQ5 | A0A1M2W105 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7. | 0.999 |
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