STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_319Cellulose-growth-specific protein. (294 aa)    
Predicted Functional Partners:
TRAPUB_9223
DNA polymerase delta small subunit.
    
 0.727
TRAPUB_2032
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 
 0.725
TRAPUB_5016
DNA repair protein rad16.
    
 0.723
TRAPUB_4278
Uncharacterized protein.
    
 0.721
TRAPUB_13870
DNA polymerase.
    
 0.721
TRAPUB_9924
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
   0.717
TRAPUB_10518
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
 
 0.714
TRAPUB_12934
Small nuclear ribonucleoprotein F.
    
  0.689
TRAPUB_1694
Uncharacterized protein.
   
   0.684
TRAPUB_672
NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family.
   
   0.681
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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