STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_14411DLH domain-containing protein. (202 aa)    
Predicted Functional Partners:
TRAPUB_13281
Hydroxyacid-oxoacid transhydrogenase, mitochondrial.
  
 
 0.568
TRAPUB_14196
Alcohol dehydrogenase 2.
  
 
 0.568
TRAPUB_7890
3-hydroxybutyryl-CoA dehydrogenase.
   
 
 0.432
TRAPUB_7889
3-hydroxybutyryl-CoA dehydrogenase.
   
 
 0.432
TRAPUB_3201
Uncharacterized protein.
   
 
 0.432
TRAPUB_11313
BetaGal_dom2 domain-containing protein.
     
 0.427
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.