STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_13932Uncharacterized protein; Belongs to the precorrin methyltransferase family. (620 aa)    
Predicted Functional Partners:
TRAPUB_6546
Sulfite reductase [NADPH] subunit beta.
 
 
 0.980
TRAPUB_1176
Porphobilinogen deaminase.
 
 
 0.971
TRAPUB_9265
Siroheme biosynthesis protein met8.
 
 
0.970
TRAPUB_357
Uroporphyrinogen-III synthase.
  
 
 0.910
TRAPUB_1818
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
 0.896
TRAPUB_11796
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.884
TRAPUB_9732
Sulfite reductase [NADPH] flavoprotein component.
 
 
 0.879
TRAPUB_3831
Phosphoadenosine phosphosulfate reductase.
 
  
 0.878
TRAPUB_13037
Sulfate adenylyltransferase.
  
  
 0.876
TRAPUB_7637
FAD synthase.
  
  
 0.799
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.