Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10249 | TRAPUB_13301 | A0A1M2W0C7 | A0A1M2VRJ4 | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | Ankyrin repeat protein nuc-2. | 0.986 |
TRAPUB_10249 | TRAPUB_13607 | A0A1M2W0C7 | A0A1M2VQH5 | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | G1/S-specific cyclin pas1. | 0.706 |
TRAPUB_10249 | TRAPUB_8339 | A0A1M2W0C7 | A0A1M2W5P3 | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | ATP-dependent DNA helicase II subunit 1. | 0.531 |
TRAPUB_11758 | TRAPUB_13301 | A0A1M2VVZ7 | A0A1M2VRJ4 | Cyclin-dependent kinase 1. | Ankyrin repeat protein nuc-2. | 0.986 |
TRAPUB_11758 | TRAPUB_13607 | A0A1M2VVZ7 | A0A1M2VQH5 | Cyclin-dependent kinase 1. | G1/S-specific cyclin pas1. | 0.706 |
TRAPUB_11758 | TRAPUB_8339 | A0A1M2VVZ7 | A0A1M2W5P3 | Cyclin-dependent kinase 1. | ATP-dependent DNA helicase II subunit 1. | 0.531 |
TRAPUB_11914 | TRAPUB_13019 | A0A1M2VVE7 | A0A1M2VS97 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | DNA ligase. | 0.718 |
TRAPUB_11914 | TRAPUB_13607 | A0A1M2VVE7 | A0A1M2VQH5 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | G1/S-specific cyclin pas1. | 0.795 |
TRAPUB_11914 | TRAPUB_4292 | A0A1M2VVE7 | A0A1M2VBA4 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | ATP-dependent DNA helicase II subunit 2. | 0.988 |
TRAPUB_11914 | TRAPUB_4472 | A0A1M2VVE7 | A0A1M2VAN4 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | DNA ligase. | 0.718 |
TRAPUB_11914 | TRAPUB_6122 | A0A1M2VVE7 | A0A1M2V6Y9 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | DNA ligase 4. | 0.926 |
TRAPUB_11914 | TRAPUB_8339 | A0A1M2VVE7 | A0A1M2W5P3 | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | ATP-dependent DNA helicase II subunit 1. | 0.989 |
TRAPUB_13019 | TRAPUB_11914 | A0A1M2VS97 | A0A1M2VVE7 | DNA ligase. | DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. | 0.718 |
TRAPUB_13019 | TRAPUB_13607 | A0A1M2VS97 | A0A1M2VQH5 | DNA ligase. | G1/S-specific cyclin pas1. | 0.719 |
TRAPUB_13019 | TRAPUB_4292 | A0A1M2VS97 | A0A1M2VBA4 | DNA ligase. | ATP-dependent DNA helicase II subunit 2. | 0.946 |
TRAPUB_13019 | TRAPUB_4472 | A0A1M2VS97 | A0A1M2VAN4 | DNA ligase. | DNA ligase. | 0.777 |
TRAPUB_13019 | TRAPUB_6122 | A0A1M2VS97 | A0A1M2V6Y9 | DNA ligase. | DNA ligase 4. | 0.686 |
TRAPUB_13019 | TRAPUB_8339 | A0A1M2VS97 | A0A1M2W5P3 | DNA ligase. | ATP-dependent DNA helicase II subunit 1. | 0.936 |
TRAPUB_13301 | TRAPUB_10249 | A0A1M2VRJ4 | A0A1M2W0C7 | Ankyrin repeat protein nuc-2. | Negative regulator of the PHO system; Belongs to the protein kinase superfamily. | 0.986 |
TRAPUB_13301 | TRAPUB_11758 | A0A1M2VRJ4 | A0A1M2VVZ7 | Ankyrin repeat protein nuc-2. | Cyclin-dependent kinase 1. | 0.986 |
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