STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_13263Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
TRAPUB_10126
Uncharacterized protein.
   
    0.701
TRAPUB_9019
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
    0.700
TRAPUB_11947
Mitochondrial import inner membrane translocase subunit TIM9.
   
  
 0.692
TRAPUB_7826
Ribosomal_L30 domain-containing protein.
   
    0.666
TRAPUB_9236
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
    0.600
TRAPUB_10369
26S proteasome non-ATPase regulatory subunit 14-like protein.
   
   0.582
TRAPUB_1643
Proteasome subunit alpha type.
   
    0.567
TRAPUB_10518
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
    0.550
TRAPUB_10948
Proteasome subunit alpha type.
   
    0.521
TRAPUB_10938
RNA polymerase I-specific transcription initiation factor rrn11.
   
    0.518
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.