STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_13066Transcription activator of gluconeogenesis ERT1. (422 aa)    
Predicted Functional Partners:
TRAPUB_10617
Uncharacterized protein.
    
 0.662
TRAPUB_7960
Non-specific serine/threonine protein kinase.
    
 0.653
TRAPUB_13362
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.650
TRAPUB_4415
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.642
TRAPUB_1988
DNA-directed RNA polymerase II subunit rpb7.
    
  0.642
TRAPUB_10772
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
  0.642
TRAPUB_11168
DNA-directed RNA polymerase II subunit RPB3.
    
  0.629
TRAPUB_12583
DNA-directed RNA polymerase II subunit rpb4.
    
  0.620
TRAPUB_10289
DNA-directed RNA polymerase II subunit RPB11.
    
  0.596
TRAPUB_10067
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.596
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.