Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10731 | TRAPUB_13055 | A0A1M2VYR0 | A0A1M2VSA2 | 60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. | Allantoicase domain-containing protein. | 0.828 |
TRAPUB_10731 | TRAPUB_4399 | A0A1M2VYR0 | A0A1M2VBC0 | 60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. | Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.774 |
TRAPUB_10731 | TRAPUB_5025 | A0A1M2VYR0 | A0A1M2V9H7 | 60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. | Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. | 0.629 |
TRAPUB_13055 | TRAPUB_10731 | A0A1M2VSA2 | A0A1M2VYR0 | Allantoicase domain-containing protein. | 60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. | 0.828 |
TRAPUB_13055 | TRAPUB_2723 | A0A1M2VSA2 | A0A1M2VFW7 | Allantoicase domain-containing protein. | Peroxisomal membrane protein PAS20. | 0.707 |
TRAPUB_13055 | TRAPUB_3189 | A0A1M2VSA2 | A0A1M2VEH1 | Allantoicase domain-containing protein. | Peroxisome biogenesis protein 19-1. | 0.814 |
TRAPUB_13055 | TRAPUB_4399 | A0A1M2VSA2 | A0A1M2VBC0 | Allantoicase domain-containing protein. | Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.846 |
TRAPUB_13055 | TRAPUB_4743 | A0A1M2VSA2 | A0A1M2VAC5 | Allantoicase domain-containing protein. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.714 |
TRAPUB_13055 | TRAPUB_5025 | A0A1M2VSA2 | A0A1M2V9H7 | Allantoicase domain-containing protein. | Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. | 0.761 |
TRAPUB_13055 | TRAPUB_5739 | A0A1M2VSA2 | A0A1M2V7P8 | Allantoicase domain-containing protein. | Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family. | 0.761 |
TRAPUB_13055 | TRAPUB_6545 | A0A1M2VSA2 | A0A1M2V5I7 | Allantoicase domain-containing protein. | Alanine--glyoxylate aminotransferase 1. | 0.703 |
TRAPUB_13055 | TRAPUB_6636 | A0A1M2VSA2 | A0A1M2V584 | Allantoicase domain-containing protein. | Allantoinase. | 0.883 |
TRAPUB_13055 | TRAPUB_9357 | A0A1M2VSA2 | A0A1M2W2J1 | Allantoicase domain-containing protein. | Cytochrome c oxidase assembly protein COX16, mitochondrial. | 0.828 |
TRAPUB_2723 | TRAPUB_13055 | A0A1M2VFW7 | A0A1M2VSA2 | Peroxisomal membrane protein PAS20. | Allantoicase domain-containing protein. | 0.707 |
TRAPUB_2723 | TRAPUB_3189 | A0A1M2VFW7 | A0A1M2VEH1 | Peroxisomal membrane protein PAS20. | Peroxisome biogenesis protein 19-1. | 0.997 |
TRAPUB_2723 | TRAPUB_6545 | A0A1M2VFW7 | A0A1M2V5I7 | Peroxisomal membrane protein PAS20. | Alanine--glyoxylate aminotransferase 1. | 0.768 |
TRAPUB_3189 | TRAPUB_13055 | A0A1M2VEH1 | A0A1M2VSA2 | Peroxisome biogenesis protein 19-1. | Allantoicase domain-containing protein. | 0.814 |
TRAPUB_3189 | TRAPUB_2723 | A0A1M2VEH1 | A0A1M2VFW7 | Peroxisome biogenesis protein 19-1. | Peroxisomal membrane protein PAS20. | 0.997 |
TRAPUB_4399 | TRAPUB_10731 | A0A1M2VBC0 | A0A1M2VYR0 | Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. | 0.774 |
TRAPUB_4399 | TRAPUB_13055 | A0A1M2VBC0 | A0A1M2VSA2 | Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | Allantoicase domain-containing protein. | 0.846 |
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