STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_12808Chitin synthase 8; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1914 aa)    
Predicted Functional Partners:
TRAPUB_126
UDP-N-acetylhexosamine pyrophosphorylase.
   
 
 0.798
TRAPUB_85
Chitin synthase; Plays a major role in cell wall biogenesis.
  
  
0.702
TRAPUB_13347
Chitin synthase 1.
  
  
0.694
TRAPUB_7349
Chitin synthase 8; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
  
  
0.672
TRAPUB_5059
UDP-glucose 6-dehydrogenase 4.
  
 
 0.651
TRAPUB_250
Acetolactate synthase.
   
 
 0.636
TRAPUB_2100
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
    
 0.624
TRAPUB_10972
Glucosamine-6-phosphate isomerase.
     
 0.583
TRAPUB_10
UBA domain-containing protein 7.
    
 0.572
TRAPUB_2158
Dihydroxy-acid dehydratase, chloroplastic.
   
 0.568
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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