STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_12544Uncharacterized protein. (288 aa)    
Predicted Functional Partners:
TRAPUB_12623
Uncharacterized protein.
    
 0.964
TRAPUB_35
Baculoviral IAP repeat-containing protein 6.
  
 0.866
TRAPUB_6702
Uncharacterized protein.
    
 0.858
TRAPUB_4719
Protein NBR1-like protein.
    
 0.829
TRAPUB_13958
Baculoviral IAP repeat-containing protein 6.
   
 0.824
TRAPUB_10277
Developmental regulator flbA.
    
 0.794
TRAPUB_8510
Transcription factor prr1.
    
 0.781
TRAPUB_2196
Protein phosphatase 2C-like protein.
    
 0.778
TRAPUB_13428
Protein phosphatase 2C-like protein.
    
 0.778
TRAPUB_10397
Protein phosphatase 2C-like protein.
    
 0.778
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.