STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_11626Uncharacterized protein. (85 aa)    
Predicted Functional Partners:
TRAPUB_11625
GFO_IDH_MocA domain-containing protein.
 
     0.883
TRAPUB_10631
Fungal_trans domain-containing protein.
    
  0.762
TRAPUB_1682
Paxillin.
     
 0.678
TRAPUB_696
L-galactonate dehydratase.
     
 0.678
TRAPUB_4607
L-arabinokinase.
  
 0.661
TRAPUB_8434
Galactokinase.
  
 0.661
TRAPUB_6363
SGL domain-containing protein.
  
 
 0.648
TRAPUB_2232
Lysine--tRNA ligase.
  
    0.585
TRAPUB_11927
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
     
 0.574
TRAPUB_8337
Antizyme inhibitor 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.570
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.