STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_11427Kinesin-like protein KIF21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2082 aa)    
Predicted Functional Partners:
TRAPUB_4633
Kinesin-like protein bimC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
0.877
TRAPUB_11003
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
0.857
TRAPUB_5226
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 0.836
TRAPUB_4549
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.826
TRAPUB_7279
Protein BIM1.
   
 
 0.778
TRAPUB_1230
cAMP-dependent protein kinase type 2; Belongs to the protein kinase superfamily.
    
 0.778
TRAPUB_12405
Uncharacterized protein.
    
 0.778
TRAPUB_11432
cAMP-dependent protein kinase catalytic subunit; Belongs to the protein kinase superfamily.
    
 0.778
TRAPUB_7123
Mitotic spindle checkpoint component mad3.
   
 0.772
TRAPUB_12025
Checkpoint serine/threonine-protein kinase bub1.
   
 0.772
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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