STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_10841MYND-type domain-containing protein. (345 aa)    
Predicted Functional Partners:
TRAPUB_13354
Uncharacterized protein.
    
 0.867
TRAPUB_3132
GRAM domain-containing protein YSP2.
    
 0.821
TRAPUB_10500
Uncharacterized protein.
    
 0.821
TRAPUB_3202
Myosin regulatory light chain cdc4.
    
 0.773
TRAPUB_2062
Calmodulin; Belongs to the calmodulin family.
    
 0.773
TRAPUB_1335
Uncharacterized protein.
    
 0.773
TRAPUB_8564
Uncharacterized protein.
    
 0.773
TRAPUB_13716
Pre-rRNA-processing protein IPI3.
    
 0.742
TRAPUB_6949
WD_REPEATS_REGION domain-containing protein.
    
  0.721
TRAPUB_6756
WD repeat-containing protein slp1.
    
  0.721
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.