STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_10624Uncharacterized protein. (335 aa)    
Predicted Functional Partners:
TRAPUB_2778
Endoplasmic reticulum vesicle protein 25.
    
 
 0.953
TRAPUB_6876
GPI-anchor transamidase.
    
 0.910
TRAPUB_3937
3-ketodihydrosphingosine reductase TSC10.
    
 0.896
TRAPUB_12994
3-ketodihydrosphingosine reductase TSC10.
    
 0.896
TRAPUB_11486
GPI transamidase component PIG-T.
    
 0.871
TRAPUB_2563
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.819
TRAPUB_314
Peroxisomal NADH pyrophosphatase NUDT12.
   
 0.812
TRAPUB_13301
Ankyrin repeat protein nuc-2.
  
 0.804
TRAPUB_387
Mannosyltransferase.
    
 0.797
TRAPUB_3241
Phosphatidylinositol-glycan biosynthesis class F protein.
    
 0.786
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.