STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_10582L51_S25_CI-B8 domain-containing protein. (152 aa)    
Predicted Functional Partners:
TRAPUB_4829
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
TRAPUB_986
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
TRAPUB_13451
30S ribosomal protein S16.
   
 0.999
TRAPUB_228
37S ribosomal protein mrp4, mitochondrial.
   
 0.998
TRAPUB_13457
37S ribosomal protein S24, mitochondrial.
   
  0.998
TRAPUB_12969
37S ribosomal protein S18, mitochondrial.
   
 0.998
TRAPUB_9477
30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 0.998
TRAPUB_11002
37S ribosomal protein S23, mitochondrial.
   
 0.997
TRAPUB_9908
37S ribosomal protein MRP2, mitochondrial.
   
 0.997
TRAPUB_4299
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
  0.997
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.