STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_10431Uncharacterized protein. (953 aa)    
Predicted Functional Partners:
TRAPUB_12558
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.848
TRAPUB_13706
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.834
TRAPUB_5709
Vacuolar protein-sorting protein BRO1.
   
   0.815
TRAPUB_2162
ATP synthase subunit delta, mitochondrial.
   
 
 0.782
TRAPUB_9956
ATP synthase subunit 4, mitochondrial.
   
   0.692
TRAPUB_11970
ATP synthase subunit O, mitochondrial.
   
 
 0.670
TRAPUB_5746
ATP synthase subunit g, mitochondrial.
    
   0.657
TRAPUB_3039
Uncharacterized protein.
    
   0.657
TRAPUB_7196
ATP-binding cassette transporter abc4.
    
 0.652
TRAPUB_7198
ATP-binding cassette transporter abc4.
    
 0.652
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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