STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_9734Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
TRAPUB_1115
Inositol-1-monophosphatase.
    
 0.799
TRAPUB_1123
Uncharacterized protein.
   
 
 0.775
TRAPUB_6291
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
  0.758
TRAPUB_11927
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
   
 
 0.702
TRAPUB_11344
GRIP domain-containing protein.
    
  0.688
TRAPUB_1003
Protein BZZ1.
   
 
  0.677
TRAPUB_4607
L-arabinokinase.
  
 0.673
TRAPUB_8434
Galactokinase.
  
 0.673
TRAPUB_14003
PHB domain-containing protein.
   
 
 0.670
TRAPUB_3105
Serine/threonine-protein kinase MRCK alpha.
    
  0.666
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.