STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_9447Conserved oligomeric Golgi complex subunit 8. (583 aa)    
Predicted Functional Partners:
TRAPUB_451
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.977
TRAPUB_13413
Conserved oligomeric Golgi complex subunit 1.
   
 0.977
TRAPUB_14184
Conserved oligomeric Golgi complex subunit 5.
    
 0.973
TRAPUB_9698
Conserved oligomeric Golgi complex subunit 7.
   
 0.968
TRAPUB_5220
Conserved oligomeric Golgi complex subunit 4.
   
 0.966
TRAPUB_8553
Conserved oligomeric Golgi complex subunit 3.
    
 0.966
TRAPUB_8103
Conserved oligomeric Golgi complex subunit 2.
    
 0.926
TRAPUB_12295
Uncharacterized protein.
   
 0.855
TRAPUB_11166
t-SNARE affecting a late Golgi compartment protein 2; Belongs to the syntaxin family.
    
 0.850
TRAPUB_4551
Guanine nucleotide exchange factor subunit Rich.
   
 0.829
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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