Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_10929 | TRAPUB_13897 | A0A1M2VY64 | A0A1M2VPX0 | Inositol-1,4,5-trisphosphate 5-phosphatase 1. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.837 |
TRAPUB_10929 | TRAPUB_2661 | A0A1M2VY64 | A0A1M2VFW6 | Inositol-1,4,5-trisphosphate 5-phosphatase 1. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.493 |
TRAPUB_10929 | TRAPUB_4068 | A0A1M2VY64 | A0A1M2VC18 | Inositol-1,4,5-trisphosphate 5-phosphatase 1. | Sorting nexin lst-4. | 0.590 |
TRAPUB_10929 | TRAPUB_4558 | A0A1M2VY64 | A0A1M2VB36 | Inositol-1,4,5-trisphosphate 5-phosphatase 1. | SAC domain-containing protein. | 0.875 |
TRAPUB_10929 | TRAPUB_9029 | A0A1M2VY64 | A0A1M2W3M6 | Inositol-1,4,5-trisphosphate 5-phosphatase 1. | Uncharacterized protein. | 0.686 |
TRAPUB_12955 | TRAPUB_13897 | A0A1M2VSE7 | A0A1M2VPX0 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.906 |
TRAPUB_12955 | TRAPUB_2661 | A0A1M2VSE7 | A0A1M2VFW6 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.816 |
TRAPUB_12955 | TRAPUB_4068 | A0A1M2VSE7 | A0A1M2VC18 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Sorting nexin lst-4. | 0.730 |
TRAPUB_12955 | TRAPUB_4558 | A0A1M2VSE7 | A0A1M2VB36 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | SAC domain-containing protein. | 0.477 |
TRAPUB_12955 | TRAPUB_9029 | A0A1M2VSE7 | A0A1M2W3M6 | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | Uncharacterized protein. | 0.689 |
TRAPUB_13127 | TRAPUB_13897 | A0A1M2VS22 | A0A1M2VPX0 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.851 |
TRAPUB_13127 | TRAPUB_2661 | A0A1M2VS22 | A0A1M2VFW6 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.732 |
TRAPUB_13127 | TRAPUB_4068 | A0A1M2VS22 | A0A1M2VC18 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | Sorting nexin lst-4. | 0.674 |
TRAPUB_13127 | TRAPUB_9029 | A0A1M2VS22 | A0A1M2W3M6 | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | Uncharacterized protein. | 0.689 |
TRAPUB_13897 | TRAPUB_10929 | A0A1M2VPX0 | A0A1M2VY64 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Inositol-1,4,5-trisphosphate 5-phosphatase 1. | 0.837 |
TRAPUB_13897 | TRAPUB_12955 | A0A1M2VPX0 | A0A1M2VSE7 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. | 0.906 |
TRAPUB_13897 | TRAPUB_13127 | A0A1M2VPX0 | A0A1M2VS22 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | ADP-ribosylation factor; Belongs to the cytochrome P450 family. | 0.851 |
TRAPUB_13897 | TRAPUB_13987 | A0A1M2VPX0 | A0A1M2VPV1 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 72 kDa inositol polyphosphate 5-phosphatase. | 0.688 |
TRAPUB_13897 | TRAPUB_14419 | A0A1M2VPX0 | A0A1M2VNL7 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Synaptojanin-2. | 0.688 |
TRAPUB_13897 | TRAPUB_2661 | A0A1M2VPX0 | A0A1M2VFW6 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. | 0.999 |
page 1 of 4