STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_8822Pyridoxal reductase. (346 aa)    
Predicted Functional Partners:
TRAPUB_8495
Tryptophan synthase.
     
 0.748
TRAPUB_9464
Pyridoxine/pyridoxamine 5'-phosphate oxidase.
     
 0.746
TRAPUB_8762
Ion_trans_2 domain-containing protein.
    
 0.720
TRAPUB_11608
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.655
TRAPUB_1081
Pyridox_oxase_2 domain-containing protein.
     
 0.653
TRAPUB_4940
Nucleoporin nup132.
   
 0.651
TRAPUB_3757
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.650
TRAPUB_14077
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.648
TRAPUB_7697
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.647
TRAPUB_926
PB1 domain-containing protein.
    
 0.595
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.