STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_8814Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
TRAPUB_7469
Multifunctional tryptophan biosynthesis protein.
  
 
 0.996
TRAPUB_6821
Multifunctional tryptophan biosynthesis protein.
  
 
 0.996
TRAPUB_8495
Tryptophan synthase.
  
 
 0.991
TRAPUB_6822
Multifunctional tryptophan biosynthesis protein.
  
 
 0.979
TRAPUB_229
Uncharacterized protein.
  
 0.860
TRAPUB_3907
Glutamine amidotransferase type-1 domain-containing protein.
  
 0.853
TRAPUB_5195
Histidine biosynthesis trifunctional protein.
  
  
 0.738
TRAPUB_11893
Chorismate synthase.
  
 
 0.675
TRAPUB_13282
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.
    
 0.574
TRAPUB_7747
Histidinol-phosphate aminotransferase.
  
  
 0.554
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.