Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TRAPUB_11630 | TRAPUB_12934 | A0A1M2VW51 | A0A1M2VSE5 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein F. | 0.999 |
TRAPUB_11630 | TRAPUB_13303 | A0A1M2VW51 | A0A1M2VRK2 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.993 |
TRAPUB_11630 | TRAPUB_4278 | A0A1M2VW51 | A0A1M2VBN5 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.978 |
TRAPUB_11630 | TRAPUB_8093 | A0A1M2VW51 | A0A1M2W666 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
TRAPUB_11630 | TRAPUB_8828 | A0A1M2VW51 | A0A1M2W494 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.677 |
TRAPUB_12934 | TRAPUB_11630 | A0A1M2VSE5 | A0A1M2VW51 | Small nuclear ribonucleoprotein F. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
TRAPUB_12934 | TRAPUB_13303 | A0A1M2VSE5 | A0A1M2VRK2 | Small nuclear ribonucleoprotein F. | Uncharacterized protein. | 0.995 |
TRAPUB_12934 | TRAPUB_4278 | A0A1M2VSE5 | A0A1M2VBN5 | Small nuclear ribonucleoprotein F. | Uncharacterized protein. | 0.964 |
TRAPUB_12934 | TRAPUB_8093 | A0A1M2VSE5 | A0A1M2W666 | Small nuclear ribonucleoprotein F. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
TRAPUB_12934 | TRAPUB_8828 | A0A1M2VSE5 | A0A1M2W494 | Small nuclear ribonucleoprotein F. | Uncharacterized protein. | 0.689 |
TRAPUB_13303 | TRAPUB_11630 | A0A1M2VRK2 | A0A1M2VW51 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.993 |
TRAPUB_13303 | TRAPUB_12934 | A0A1M2VRK2 | A0A1M2VSE5 | Uncharacterized protein. | Small nuclear ribonucleoprotein F. | 0.995 |
TRAPUB_13303 | TRAPUB_4278 | A0A1M2VRK2 | A0A1M2VBN5 | Uncharacterized protein. | Uncharacterized protein. | 0.968 |
TRAPUB_13303 | TRAPUB_8828 | A0A1M2VRK2 | A0A1M2W494 | Uncharacterized protein. | Uncharacterized protein. | 0.661 |
TRAPUB_13870 | TRAPUB_5016 | A0A1M2VPU3 | A0A1M2V9R6 | DNA polymerase. | DNA repair protein rad16. | 0.807 |
TRAPUB_13870 | TRAPUB_6803 | A0A1M2VPU3 | A0A1M2W6Z7 | DNA polymerase. | DNA replication ATP-dependent helicase/nuclease DNA2. | 0.935 |
TRAPUB_13870 | TRAPUB_8828 | A0A1M2VPU3 | A0A1M2W494 | DNA polymerase. | Uncharacterized protein. | 0.721 |
TRAPUB_13870 | TRAPUB_9223 | A0A1M2VPU3 | A0A1M2W2Y0 | DNA polymerase. | DNA polymerase delta small subunit. | 0.999 |
TRAPUB_4278 | TRAPUB_11630 | A0A1M2VBN5 | A0A1M2VW51 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.978 |
TRAPUB_4278 | TRAPUB_12934 | A0A1M2VBN5 | A0A1M2VSE5 | Uncharacterized protein. | Small nuclear ribonucleoprotein F. | 0.964 |
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