STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPUB_8318Spindle pole body-associated protein sad1. (924 aa)    
Predicted Functional Partners:
TRAPUB_1700
HTH APSES-type domain-containing protein.
    
 
 0.675
TRAPUB_346
Histone H2A; Belongs to the histone H2A family.
    
 
 0.518
TRAPUB_4837
Cell division control protein 31.
    
 
 0.456
TRAPUB_2719
Stress protein DDR48.
    
 
 0.449
TRAPUB_1406
Inner nuclear membrane protein SRC1.
    
 
 0.449
TRAPUB_7057
Serine/threonine-protein kinase.
   
 
 0.442
TRAPUB_8749
Protein MLP1-like protein.
    
 
 0.427
TRAPUB_2153
Serine/threonine-protein kinase PLK4.
   
 
 0.417
TRAPUB_4736
Nucleoporin pom152.
    
 
 0.412
TRAPUB_4418
Homoserine O-acetyltransferase.
    
 
 0.412
Your Current Organism:
Trametes pubescens
NCBI taxonomy Id: 154538
Other names: T. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.