STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08326.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
AIS08327.1
DNA recombination and repair protein RecF.
  
  
 0.933
AIS08328.1
DNA gyrase subunit B.
  
  
 0.848
AIS08329.1
DNA gyrase subunit A.
  
  
 0.836
AIS08325.1
DNA polymerase III beta subunit.
  
  
 0.793
AIS08324.1
Chromosomal replication initiator protein DnaA.
  
  
 0.679
AIS08330.1
SSU ribosomal protein S6p.
     
 0.532
AIS09489.1
DNA polymerase I.
   
    0.445
AIS08331.1
Single-stranded DNA-binding protein.
       0.443
AIS08332.1
SSU ribosomal protein S18p / SSU ribosomal protein S18p, zinc-independent.
       0.415
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.