STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08333.1Phosphoesterase, DHH family protein. (673 aa)    
Predicted Functional Partners:
AIS08334.1
LSU ribosomal protein L9p.
  
 0.957
AIS08335.1
Replicative DNA helicase.
  
  
 0.772
AIS09470.1
UPF0348 protein family.
  
     0.698
AIS09356.1
DNA polymerase III alpha subunit.
  
     0.569
AIS08332.1
SSU ribosomal protein S18p / SSU ribosomal protein S18p, zinc-independent.
       0.568
AIS09564.1
Protein from nitrogen regulatory protein P-II (GLNB) family.
  
  
 0.537
AIS09352.1
Ribosomal protein L7Ae family protein.
 
     0.499
AIS08764.1
Hypothetical protein.
  
     0.488
AIS08331.1
Single-stranded DNA-binding protein.
       0.485
AIS09761.1
Veg protein.
  
    0.442
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.