STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08341.1ABC-type multidrug transport system, ATPase and permease components. (61 aa)    
Predicted Functional Partners:
AIS08604.1
ABC transporter ATPase and permease components.
 
 
 0.633
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
 
 0.548
AIS09345.1
Chaperone protein DnaK.
  
 0.533
AIS08756.1
Hypothetical protein.
   
 0.512
AIS09453.1
Rhodanese-like domain protein.
  
 
 0.490
AIS09351.1
Translation initiation factor 2.
  
 
 0.468
AIS08342.1
Hypothetical protein.
       0.467
AIS09261.1
Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly.
   
   0.453
AIS09404.1
Acyl carrier protein.
  
 
 0.446
AIS09736.1
Acyl carrier protein.
  
 
 0.446
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.