STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08349.1ABC transporter ATPase and permease components. (523 aa)    
Predicted Functional Partners:
AIS08364.1
Transcriptional regulator.
  
     0.645
AIS09713.1
Hypothetical protein.
 
   
 0.635
AIS08348.1
Hypothetical protein.
       0.572
AIS08604.1
ABC transporter ATPase and permease components.
 
 
0.563
AIS09741.1
Transcriptional regulator.
  
     0.549
AIS09933.1
2-amino-3-ketobutyrate coenzyme A ligase.
  
 
 0.548
AIS09345.1
Chaperone protein DnaK.
  
 0.533
AIS08998.1
ABC transporter, ATP-binding protein.
 
 0.532
AIS09241.1
Hypothetical protein.
  
     0.522
AIS08756.1
Hypothetical protein.
   
 0.512
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.