STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS08371.1Trehalose operon transcriptional repressor. (243 aa)    
Predicted Functional Partners:
AIS08370.1
Trehalose-6-phosphate hydrolase.
 
  
 0.929
AIS08372.1
PTS system, trehalose-specific IIB component.
 
  
 0.832
AIS09924.1
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.545
AIS09843.1
Transcriptional regulator.
  
  
 0.529
AIS08655.1
PTS system, sucrose-specific IIB component.
 
  
 0.521
AIS09390.1
PTS system, beta-glucoside-specific IIB component.
  
  
 0.431
AIS09949.1
PTS system, beta-glucoside-specific IIB component / PTS system, beta-glucoside-specific IIC component / PTS system, beta-glucoside-specific IIA component.
  
  
 0.431
Your Current Organism:
Lactobacillus sp. wkB8
NCBI taxonomy Id: 1545702
Other names: L. sp. wkB8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.